Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQHPAEHSPLGKTSEYVSSYTPSLLFPISRTAKWAELGLSAETLPYRGVDIWNCYELSWLTPAGKPVVAIGEFSIPADSPNIIESKSFKLYLNSLNQSAFDSREALRAVLQKDLSAAVGAPVGVRLRSLDEVAEEGIGRLPGRCIDELDIAVDGYEQPRPELLRCDAGRIVEEQLYSHLLKSNCPVTGQPDWGTLVVDY--RGPALDPASLLAYLVSFRQHQDFHEQCVERIFLDLQRLLQPQALSVYARYVRRGGLDINPYRSLAEVAPDNRRLVRQ |
4F8B Chain:D ((52-139)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FTSLCPKTGQPDFATIYISYIPDEKMVESKSLKLYLFSFRNHGDFHEDCMNIIMNDLIELMDPRYIEVWGKFTPRGGISIDPYTNYGK----------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4F8B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -44794 for 563 contacts (-79.6/contact) +
2D Compatibility (PS) -9174 + (NN) -5740 + (LL) 11920
1D Compatibility (HY) -10000 + (ID) 1750
Total energy: -59538.0 ( -105.75 by residue)
QMean score : 0.392
|
|
|