Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKLFATGLAASFLLLPPAQAAPPAPYGVQPHQQAVQRAGEQRQRQLQEQRQRFDEQRLQLQQDQLQRQQQNLQRQRQQRQMQDNLIRQQQLDQQRWRLEQDQRRLDSERRQLENRRRQSQSPAIR
1QVR Chain:A ((414-497))
----------------------------------------EIEREALKKEKDPDSQERLKAIEAEIAKLTEEIAKLRAEWEREREILR---------KLREAQHRLDEVRREIELAERQ-------
General information:
TITO was launched using:
RESULT:
Template:
1QVR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 15588 for 305 contacts (51.1/contact) +
2D Compatibility (PS) -8183 + (NN) -4184 + (LL) 4104
1D Compatibility (HY) -2400 + (ID) 800
Total energy: 4125.0 ( 13.52 by residue)
QMean score : 0.602
(partial model without unconserved sides chains):
PDB file :
Tito_1QVR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QVR-query.scw
PDB file :
Tito_Scwrl_1QVR.pdb
: