Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNPLIKTILSTNAGAGLAILRIVTGLTLMSHGSQKLFGMFG----GAGLNGMAQWFESIGLTPGYLLATLAGSAEFFGGLALVIGLLVRPASVVVGFTMIVAIFSVHIGNGFFITDNGYEYALTLLMISVALLIDGAGKFSLDGKLSR
3K8U Chain:A ((5-141))
HYKLVPQ--IDTRDCGPAVLASVAKHYGSNYSIAYLRELSKTNKQGTTALGIVEAAKKLGFETRSIKADMTLFDYNDLTYPFIVHVIKGK-----RLQHYYVVYGSQ-NNQLIIGDPDPSVKVTRMSKERFQSEWTGLAIFLAPQ---
General information:
TITO was launched using:
RESULT:
Template:
3K8U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -124725 for 1055 contacts (-118.2/contact) +
2D Compatibility (PS) -14554 + (NN) -3665 + (LL) 1524
1D Compatibility (HY) -2000 + (ID) 750
Total energy: -144170.0 ( -136.65 by residue)
QMean score : 0.228
(partial model without unconserved sides chains):
PDB file :
Tito_3K8U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3K8U-query.scw
PDB file :
Tito_Scwrl_3K8U.pdb
: