Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLSEPVRRCPRNGKRIAREPGDRPGTFRLIHPRWAGASVKRAVRACSSCVLLCHAHANPEGTHHVQQHPGARQLHHLPVEATEPGHRRRPARRAAGLFRRFLAHRRGTQRRPRYPAQLRLPLPLSREGTRMIKRIAQTAGFAGLLAALLLTLLQILWVTPLILEAETYEKSEPVAAQPHEHAPGVAAHVHDEEAWEPEDGWQRTLSTTGGNLVVAVGFALMLAGLFTLRAPGQTWQGLLWGLAGYAVFCLAPSLGLPPELPGTAAADLVQRQYWWIATAAATAVGLALLVFGGNWPL------KLVGAVLLALPHLFGAPQPEVHASLAPEALAQRFVVASLVSNALFWAALGLAAAWLFRRNRGGVDA |
| 4NL7 Chain:A ((1-272)) | GVPEQEDSVLFRRGTGQSDDSDIWDDTALIKAYDKAVASFKHALKNGDIC-------------------------------ETSGKPKTTPKRKPAKKNKSQKKNTAASLQQWKVGDKCSAIW--SEDGCIYPATIASID----------------FKRETCVVVYTGYGNREEQNLSDLLSPICEVANNIEQNAQENENESQVSTDESENS-----------------RSPGNKSDNIKPKSAPWNSF-----LPPPPPMPGPRLGP-----------------GKPGLKFNGPPPPPPPPPPHLLSCWLPPFPS--GPPIIPPPPPICPDSLDDA---DALGSMLISWYMSGYHTGYYMEMLA----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4NL7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 20760 for 1641 contacts (12.7/contact) +
2D Compatibility (PS) -27773 + (NN) -10598 + (LL) 9164
1D Compatibility (HY) 800 + (ID) 2500
Total energy: -10147.0 ( -6.18 by residue)
QMean score : 0.031
|
|
|