Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIRRHSCKGVGSSVAWSLLGLAISAQSLAGTVTTDGADIVIKTKGGLEVATTDKEFSFKLGGRLQADYGRFDGYYTNNGNTADAAYFRRAYLEFGGTAYRDWKYQINYDLSRNVGNDSAGYFDEASVTYTGFNPVNLKFGRFYTDFGLEKATSSKWVTALERNLTYDIADWVNDNVGTGIQASSVVGGMAFLSGSVFSENNNDTDGDSVKRYNLRGVFAPLHEPGNVVHLGLQYAYRDLEDSAVDTRIRPRMGMRGVSTNGGNDAGSNGNRGLFGGSSAVEGLWKDDSVWGLEGAWALGA-FSAQAEYLRRTVKAERDREDLKASGYYAQLAYTLTGEPRLYKLDGAKFDTIKPENKEIGAWELFYRYDSIKVEDDNIVVDSATREVGDAKGKTHTLGVNWYANEAVKVSANYVKAKTDKISNANGDDSGDGLVMRLQYVF |
3PRN Chain:A ((192-289)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DIAFVGAAYKFNDAGTVGLNWYDNGL-------STAGDQVTLYGNYAFGA------------------------TTVRAYVSDIDRA---------------GADTAYGIGADYQFAEGVKVSGSVQSGFAN----------ETVADVGVRFDF |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3PRN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -6596 for 570 contacts (-11.6/contact) +
2D Compatibility (PS) -9872 + (NN) 3212 + (LL) 14032
1D Compatibility (HY) -2800 + (ID) 500
Total energy: -2524.0 ( -4.43 by residue)
QMean score : 0.038
|
|
|