Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDLFADAPLTLPDADLRYLPHWLDAPLASAWLLRLEQETPWEQPIL---RIHGEEHPTPRLVAWYGDPDAAYRYSGQVHRPLPWTALLGEIRERVEREVGQRVNGVLLNYYRDGQDSMGWHSDDEPELRRDPLVASLSLGGSRRFDLRRK---GQT---RIAHS-LELTHGSLLVMRGATQHHWQHQVAKTRRSCMPRLNLTFRLVYPQP
3RZH Chain:A ((33-204))
----------------------------------LEKEVEYFTGALARVQVFGKWHSVPRKQATYGDAGLTYTFSGLTLSPKPWIPVLERIRDHVSGVTGQTFNFVLINRYKDGSDHICEHRDDERELAPGSPIASVSFGASRDFVFRHKDSR---PSRRVAVVRLPLAHGSLLMMNHPTNTHWYHSLPVRKKVLAPRVNLTFRKI----
General information:
TITO was launched using:
RESULT:
Template:
3RZH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42506 for 1116 contacts (-38.1/contact) +
2D Compatibility (PS) -16925 + (NN) -5549 + (LL) 2452
1D Compatibility (HY) -10400 + (ID) 3400
Total energy: -76328.0 ( -68.39 by residue)
QMean score : 0.344
(partial model without unconserved sides chains):
PDB file :
Tito_3RZH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RZH-query.scw
PDB file :
Tito_Scwrl_3RZH.pdb
: