Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPRAAVVCGLGSYLPEAVLSNDMLAAELDTSDAWISSRTGVRQRHIAG-DLGSGDLALRAASAALASAGLER--VDAVVLATSTGDFCCPATAPRVAARLGLVGALAFDLSAACTGFVYGLASVGSLISAGLADSALLVGVDTFSHTLDPADRSTRALFGDGAGAVVLRAGDAEEEGALLAFDLGSDGHQFDLLMTPAVSRAERSSGQASNYFRMDGKAVFGQAVTQMSDSVRRVLDRVGWQASDLHHLVPHQANTRILAAVADQLDLPVERVVSNIAEVGNTVAASIPLALAHGLRQGILRDGGNMVLTGFGAGLTWGSVALRWPKIVPTMD
2GYO Chain:A ((5-317))------IIGTGSYLPEQVRTNADLEKMVDTSDEWIVTRTGIRERHIAAPNETVSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKGCPAFDVAAACAGFTYALSVADQYVKSGAVKYALVVGSDVLARTCDPTDRGTIIIFGDGAGAAVLAA---SEEPGIISTHLHADGSYGELLTLP---NADRVNPENSIHLTMAGNEVFKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLRIISATAKKLGMSMDNVVVTLDRHGNTSAASVPCALDEAVRDGRIKPGQLVLLEAFGGGFTWGSALVRF--------


General information:
TITO was launched using:
RESULT:

Template: 2GYO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -270407 for 2956 contacts (-91.5/contact) +
2D Compatibility (PS) -32020 + (NN) -3940 + (LL) 1216
1D Compatibility (HY) -21600 + (ID) 6350
Total energy: -333101.0 ( -112.69 by residue)
QMean score : 0.516

(partial model without unconserved sides chains):
PDB file : Tito_2GYO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2GYO-query.scw
PDB file : Tito_Scwrl_2GYO.pdb: