Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLIPHDL---------------LEADTLNNLLEDFVT----REGTDNGDETPLDVRVERARHALRRGEAVILFDPESQQCQLMLRSEVPAELLRD
4HHZ Chain:A ((83-158))
-LIPHDFGMKKPPLLNNADSVQAKAEMLDNLLDIEVAYSLLRGGSDDSSKDPIDVNYEKLKTDIK------VVDRDSEEAEII------------
General information:
TITO was launched using:
RESULT:
Template:
4HHZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3173 for 203 contacts (-15.6/contact) +
2D Compatibility (PS) -5926 + (NN) -2478 + (LL) 1808
1D Compatibility (HY) -4800 + (ID) 1000
Total energy: -15569.0 ( -76.69 by residue)
QMean score : 0.384
(partial model without unconserved sides chains):
PDB file :
Tito_4HHZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HHZ-query.scw
PDB file :
Tito_Scwrl_4HHZ.pdb
: