Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFSFHIPNMTCGGCAKTVTRILHGVDPQARVETDPPRREARV---ESTLDKHAFLEALSEAGYPEGR
1AFI Chain:A ((5-67))
-VTLAVPGMTCAACPITVKKALSKVEGVSKVDVGFEKREAVVTFDDTKASVQKLTKATADAGYP---
General information:
TITO was launched using:
RESULT:
Template:
1AFI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33492 for 454 contacts (-73.8/contact) +
2D Compatibility (PS) -6735 + (NN) -6683 + (LL) 240
1D Compatibility (HY) -3600 + (ID) 950
Total energy: -51220.0 ( -112.82 by residue)
QMean score : 0.597
(partial model without unconserved sides chains):
PDB file :
Tito_1AFI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFI-query.scw
PDB file :
Tito_Scwrl_1AFI.pdb
: