Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKAYDIEIVNDAAHAGEANHGWCFGLPPGIRPEQWPLDPDTGYPLMHGFTLLLPEDYRV--HGPEIVALSFFSLAPDQNDGGPTSVDGIREMLIDPPAQPPAEAELRPFWEAGRNSHPRLHRMEDILGGAYALILLDAAEFSGAPCQPRALPAGNPLLAQTEPPQWLEAGSAASFVPDWAEDDYYLLRALGGRPAAGHQQRYPLRWTARAQDPNAGVVPSEYGDGGYQLPHYWLDGKIERDNYREHPWVEGHLPNHIGGTMRPVQGVPEMSPFYVEFEEYLGGYNFGGGNAQLDFRDMRFDWACG |
3TND Chain:B ((19-34)) | -------------------------------------------------AVRLPKAVALPENVKR------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TND.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2347 for 34 contacts (-69.0/contact) +
2D Compatibility (PS) -1485 + (NN) -1400 + (LL) 12092
1D Compatibility (HY) -1200 + (ID) 100
Total energy: 5560.0 ( 163.53 by residue)
QMean score : 0.021
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