Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAIEKHNIKLATFIAALFYDLSTQKQVRIPTQIEKRDREL----------YELVKKSKRPVALLVDETHDLNGHTLTGLKRL--LELAEDDSGRRR-----LSIVLAGHPKLCNDLRRPTMEEIGYRTDIFELQEKMQSAGLPV
3N4P Chain:A ((155-271))
----RQSVQSSTLIRVLFYHTPDQNHIEQPFYLMGRDKALAVEQFISRFNSGYIKASQELVSYTIKLSHDPIEYLLEQIQNLHR------------SDDLIIAVIMATY--LCDDI----------------------------
General information:
TITO was launched using:
RESULT:
Template:
3N4P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3436 for 338 contacts (-10.2/contact) +
2D Compatibility (PS) -8135 + (NN) -420 + (LL) 3368
1D Compatibility (HY) -7200 + (ID) 1050
Total energy: -16873.0 ( -49.92 by residue)
QMean score : 0.127
(partial model without unconserved sides chains):
PDB file :
Tito_3N4P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3N4P-query.scw
PDB file :
Tito_Scwrl_3N4P.pdb
: