Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------MLLLVLAVQMSGCATVRTLDAAKPGAPVVYAGTRLDWYSLHGGCCPMERFGAEAPAHPGLDLPGSALLDTLLLPFSLATAIGLNLGVSGGM
4U1E Chain:G ((11-99))
EIIENADGSRSIITYKIEDGVKYKITQKVKEVKVLEKVHKSVAERK------NWHKYGSEKGSPAGPSAVTARLGEEVELRLSRNWKQAEEERIQ---
General information:
TITO was launched using:
RESULT:
Template:
4U1E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7979 for 306 contacts (-26.1/contact) +
2D Compatibility (PS) -8787 + (NN) -3625 + (LL) -148
1D Compatibility (HY) 1600 + (ID) 350
Total energy: -19289.0 ( -63.04 by residue)
QMean score : -0.149
(partial model without unconserved sides chains):
PDB file :
Tito_4U1E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4U1E-query.scw
PDB file :
Tito_Scwrl_4U1E.pdb
: