Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIDIDRLSKRFSGRTVVNDLSFRIDRGEIVGLLGPNGAGKSTTLKMLSGFLAPSAGSVRIFGFDMQDKARQAQKLIGYLPENAPSYGEMTVEGFLAFVASIRDYSGREKRRRIDSAMDCMELRDERRSIIETLSKGFKRRVALAQAILHDPELLLLDEPTDGLDPNQKHQVRQLVKNLSES-KIVVIS-THILEEVSFMCSRALVINGGRLLADNTPGELRTRSRYHHAVSLSIEAPVDPLAIAMLPGVAGIEGRPDRAGTLTILARPGAQILPALNRLIHGSGWRVSGVRTEHGQLEEVFRQLTREPPA |
| 1VCI Chain:A ((13-239)) | -VKLENLTKRFGNFTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRIY-FGDRDVTYLPPKDRNISMVFQ------HMTVYENIAFPL--KKFPKDEIDKRVRWAAELLQIEELLNRYPAQLSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDAKLRVAMRAEIKKLQQKLKVTTIYVTHDQVEAMTMGDRIAVMNRGQLLQIGSPTEVYLR--------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VCI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -117450 for 1668 contacts (-70.4/contact) +
2D Compatibility (PS) -22260 + (NN) -5676 + (LL) 5796
1D Compatibility (HY) -13200 + (ID) 3550
Total energy: -156340.0 ( -93.73 by residue)
QMean score : 0.439
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