Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVEAAKNARELLLKEYRAVLSTHSKKWPGFPFGSVVPYCLDAEGRPLILISRIAQHTHNLQADPRCSMLVGERGAEDIQAVGRLTLLAEARQLAEEEVAAAAERYYRYFPESADYHRVHDFDFWVLQPVQWRFIGGFGAIHWLAAERVPLA-NPFAGEAERGMVEHMNSDHAAAIAHYVELAGLPAHAAAQLAGIDTEGFHLRIGQGLHWLPFPAACGNPGAVRQALVQLARAERWPTVEPEQG
2ARZ Chain:A ((5-242))
-SVEAAKNARELLLKEYRAVLSTHSKKWPGFPFGSVVPYCLDAEGRPLILISRIAQHTHNLQADPRCSMLVGERGAEDIQAVGRLTLLAEARQLAEEEVAAAAERYYRYFPESADYHRVHDFDFWVLQPVQWRFIGGFGAIHWLAAERVPLANPFAG-EAERGMVEHMNSDHAAAIAHYVELAGLPAHAAAQLAGIDTEGFHLRIGQGLHWLPFPAACGNPGAVRQALVQLARAERWPTV-----
General information:
TITO was launched using:
RESULT:
Template:
2ARZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -138216 for 1799 contacts (-76.8/contact) +
2D Compatibility (PS) -25642 + (NN) -13751 + (LL) 52
1D Compatibility (HY) -30400 + (ID) 11650
Total energy: -219607.0 ( -122.07 by residue)
QMean score : 0.497
(partial model without unconserved sides chains):
PDB file :
Tito_2ARZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ARZ-query.scw
PDB file :
Tito_Scwrl_2ARZ.pdb
: