Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLTLLRRGLLVFLAAFPLLSMAAPTPQQVVQGTVDELLSDIKANKAAYKADPQKLYATLDRILGPVVDAEGIAKSVMTVKYSRQASPEQIKRFEEVFKNSLMQFYGNALLEYDNQDIRVLPSSAKPSDDRASVNMEIR-DSKGTVYPVSYTMTNLAGGWKVRNVIINGINIGKLFRDQFADTMQKNRNDLEKTIAGWGEVVAKAKETAKAEEAGAK |
3DUK Chain:A ((84-121)) | -------------------------------------------------------------------------------------------------------------------------------GTVAHARVEAENWTNFKFSD-LFLLLKLDGKWTIVNKVF-------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DUK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6551 for 168 contacts (-39.0/contact) +
2D Compatibility (PS) -4035 + (NN) -728 + (LL) 13312
1D Compatibility (HY) -2000 + (ID) 300
Total energy: -302.0 ( -1.80 by residue)
QMean score : 0.260
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