Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSLLDIKNLSVRFGD-TTAVPVVDGLDLSVDKGEVLAIVGESGSGKSVTMMALMGLIDAPGWVSADHLRFDGHDMLTLK----GRQRRRIVGKDMAMVFQDPMTALNPSYTVGYQIEEVLRLHLGLRGKALRQRALELLERVEIPAAASRLDAYPHQLSGGMSQRVAIAMAIAAEPKLLIADEPTTALDVTIQAQIMELLLNLQRDQDMALILITHDLAVVAETAQRVCVMYAGEAVEIGGVPALFDRPTHPYTEALIKA-----IPEHCAGEARLATLPGIVPGRYDRPRGCLLSPRCPYAQEHCRQERPALETHERGAVRCFYPLNLLNEVA |
3TUZ Chain:C ((24-274)) | --MIKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKS-TLIRCVNLLERP---TEGSVLVDGQELTTLSESELTKARRQI-----GMIFQH--FNLLSSRTVFGNVALPLELDNTPKDE-VKRRVTELLSLVGL---GDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDQATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFSHPKTPLAQKFIQSTLHLDIPE------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TUZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -214434 for 1987 contacts (-107.9/contact) +
2D Compatibility (PS) -26756 + (NN) -14979 + (LL) 4904
1D Compatibility (HY) -21200 + (ID) 4150
Total energy: -276615.0 ( -139.21 by residue)
QMean score : 0.535
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