Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTMRGWILAGLLLAALAAQAGEVHGVEVEARLRDYFFDAARRGDQAMLKEFVEAGFDLDVQDAKGYTALILAAYHGHGGAVEQLLEAGADPCVQDARGNTALMGAIFKGEVRIARRLIGAQCSPDQRNGAGQTAAMYAALFKREELLQALSARGADLGARDALGNSVESLRRGELNGTAAAR
4DRX Chain:E ((18-148))
------------------------------------LLEAARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIMGSTPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVNAQDKFGKT----------------
General information:
TITO was launched using:
RESULT:
Template:
4DRX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60016 for 1119 contacts (-53.6/contact) +
2D Compatibility (PS) -15176 + (NN) -15815 + (LL) 4708
1D Compatibility (HY) -6000 + (ID) 2150
Total energy: -94449.0 ( -84.40 by residue)
QMean score : 0.721
(partial model without unconserved sides chains):
PDB file :
Tito_4DRX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4DRX-query.scw
PDB file :
Tito_Scwrl_4DRX.pdb
: