Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDEQPLSRPGAHVKYAVLGATGLLGHHAARAIRAAGH-----DLVLIHRPSSQIQRLAYL-----EPECRVA--EMLDHAGLERALRGLDGVI-FSAGYYPSRPRRWQEEVASALGQTN-----PFYAACLQARVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLP-SGKSSYVLCKWALDEQAREQARN-GLPVVIG---------------IPGMVLGELDIGPTTGRVITAIGNGEMTHYVAGQRNVIDAAEAGRGLLMALERGRIGERYLLTGHNLEMAD--LTRRIAELLGQPAPQPMSMAMARALATLGRLRYRVSGQLPLLDETAIEVMAGGQFLDGRKAREELGFFSTTALDDTLLRAIDWFRDNGYFNA |
| 1R66 Chain:A ((5-314)) | ----------------VTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAIVHFAAESHVDR----SIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTDEVYGSIDSGS------WTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLD-----GGTLPLYGDG------ANVREWVHTDDHCRGIALVLAGGRAGEIYHIGG-GLELTNRELTGILLDSLGADWSSVRKVADRKG----HDLRYS---------------------LDGGKIERELGYRPQVSFADGLARTVRWYREN----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R66.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144685 for 2142 contacts (-67.5/contact) +
2D Compatibility (PS) -29942 + (NN) -13066 + (LL) 3768
1D Compatibility (HY) -11600 + (ID) 4350
Total energy: -199875.0 ( -93.31 by residue)
QMean score : 0.471
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