Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNGLPMNLIWFRCDLRTTDNSALLAAADGRPCLALYLLSPAQWREHDDAPCKVDFWLRNLGELQRQLAALNIPLLVRDCGHWRQAPEVIGRLCRELGVGAVHVNQEYGVNEERRDQAVGQRLREQGVAFHSHLDQLFFAPGSVLTRTGGYFQVFSQFRKVCHERLYQALPGVRPRPQPQPPHALASDPLPDAVPAFPRPADSLRRLWPAGEEVAQERLRDFADQHLADYHERRDFPALPGTSQLSPYLAAGVLSPRQCLDAALVANRGEFSGGQQGAATWINELLWREFYKHILVGYPRVSRHRPFREETEALRWRQAPAELEAWQQGRTGIPIIDAAMRQLLATGWMHNRLRMVVAMFLSKNLLIDWREGERWFMRHLIDGDLAANNGGWQWSASTGTDAVPYFRLFNPLSQSERFDPRGEFIRHWLPELAGLERKAIHDPSSLGLFAGVDYPRPMVDLKASRERALAAFRNLPPRDGRA |
| 2J07 Chain:A ((5-390)) | -------LVWHRGDLRLHDHPALLEALARGPVVGLVVLDPNNLK---TTPRRRAWFLENVRALREAYRARGGALWVLEGLPWEKVPEAARRL-KAKAVYALTSHTPYGRYRD-------GRVRE-ALPVPLHLLPAPHLLPPDLPRA---YRVYTPFSRLYRGAAPPLPPPEALPKGPE------EGEIPREDPGLPLPE--------PGEEAALAGLRAFLEAKLPRYAEERDRLDGEGGSRLSPYFALGVLSPR------LAAWEAERRGGE-GARKWVAELLWRDFSYHLLYHFPWMA-ERPLDPRFQAFPWQEDEALFQAWYEGKTGVPLVDAAMRELHATGFLSNRARMNAAQFAVKHLLLPWKRCEEAFRHLLLDGDRAVNLQGWQWAGGLGVDAAPYFRVFNPVLQGERHDPEGRWLKRWAPE--------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2J07.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127243 for 3299 contacts (-38.6/contact) +
2D Compatibility (PS) -41042 + (NN) -11699 + (LL) 4760
1D Compatibility (HY) -21200 + (ID) 7450
Total energy: -203874.0 ( -61.80 by residue)
QMean score : 0.414
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