Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNVLIVDDEPLARERLARLVGQLDGYRVLEPSASNGEEALTLIDSLKPDIVLLDIRMPGLDGLQVAARLCEREAPPAVIFCTAHDEFALEAFQVSAVGYLVKPVRSEDLAEALKKASRPNRVQLAALTKPPASGGSGPRSHISARTRKGIELIPLEEVIFFIADHKYVTLRHAQGEVLLDEPLKALEDEFGERFVRIHRNALVARERIERLQRTPLGHFQLYLKGLDGDALTVSRRHVAGVRRLMHQL
3A10 Chain:A ((4-113))
--ILVVDDEPNIRELLKEELQEE-GYEI--DTAENGEEALKKFFSGNYDLVILDIEMPGISGLEVAGEIRKKKKDAKIILLTAYSHYRSDMSSWAADEYVVKSFNFDELKEKVKK-------------------------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3A10.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -92306 for 852 contacts (-108.3/contact) +
2D Compatibility (PS) -11984 + (NN) -7132 + (LL) 10256
1D Compatibility (HY) -9200 + (ID) 2100
Total energy: -112466.0 ( -132.00 by residue)
QMean score : 0.701
(partial model without unconserved sides chains):
PDB file :
Tito_3A10.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3A10-query.scw
PDB file :
Tito_Scwrl_3A10.pdb
: