Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHSLQAKILDPRLGSDFPLPQYATPGSAGLDLRAMLKEDSVLGPGQTLLIPTGLSIYIADPGLAALVLPRSGLGHKHGIVLGNLVGLIDSDYQGELMVSCWNRGESPFTIAVGERIAQLVLVPVVQAHFELVEAFDESQRGAGGFGHSGSH
4OOP Chain:A ((40-157))
------------------IPTRGSPLSAGYDLSSAV--DSKVPARGKALIPTDLSIAVPE-GTYARIAPRSGLAWKHSIDVG--AGVIDADYRGPVGVILFNHSDADFEVKFGDRIAQLIIEKIVTPDVVEVDDLDETVRG----------
General information:
TITO was launched using:
RESULT:
Template:
4OOP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -99011 for 758 contacts (-130.6/contact) +
2D Compatibility (PS) -12678 + (NN) -3984 + (LL) 628
1D Compatibility (HY) -8000 + (ID) 2400
Total energy: -125445.0 ( -165.49 by residue)
QMean score : 0.378
(partial model without unconserved sides chains):
PDB file :
Tito_4OOP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4OOP-query.scw
PDB file :
Tito_Scwrl_4OOP.pdb
: