Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDDGSVSDIKRGRAARNAKLASIPVGFAGRAALGLGKRLTGKSKDEVTAELMEKAANQLFTVLGELKGGAMKVGQALSVMEAAIPDEFGEPYREALTKLQKDAPPLPASKVHRVLDGQLGTKWRERFSSFN-DTPVASASIGQVHKAIWS-DGREVAVKIQYPGADEALRADLKTMQRMVGVLKQLSPGADVQGVVDELVERTEMELDYRLEAANQRAFAKAYHDHPRFQVPHVVASAPKVVIQEWIEGVPMAEIIRHGT--TEQRDLIGTLLAELTFDAPRRLGLMHGDAHPGNFMLLPDGRMGIIDFGAVAPMPGGFPIELGMTIRLAREKNYDLLLPTMEKAGLIQRGRQVSVREIDEMLRQYVEPIQVEVFHYTRKWLQKMTVSQIDRSVAQIRTARQMDLPAKLAIPMRVIASVGAILCQLDAHVPIKALSEELIPGFAEPDAIVV |
3V8S Chain:A ((69-220)) | -------------------------------------------------------------------------------------------------------------------------------EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIK-RSDSAFFWEERDIMA-------------------------FANSPWVVQLFYAFQDDRYLY-----------MVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLA-LDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK-------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3V8S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -64003 for 1027 contacts (-62.3/contact) +
2D Compatibility (PS) -16302 + (NN) -5434 + (LL) 23244
1D Compatibility (HY) -9200 + (ID) 1150
Total energy: -72845.0 ( -70.93 by residue)
QMean score : 0.214
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