Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDYDFKAKLAAERERVEDLFEYEGCKVGRGTYGHVYKARRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYFQEDPLPTLDVFAGCQIPYPKREFLNEDDPEEKGDKNQQQQQNQHQQPTAPPQQAAAPPQAPPPQQNSTQTNGTAGGAGAGVGGTGAGLQHSQDSSLNQVPPNKKPRLGPSGANSGGPVMPSDYQHSSSRLNYQSSVQGSSQSQSTLGYSSSSQQSSQYHPSHQAHRY |
| 4EK4 Chain:A ((11-294)) | ------------------------EKIGEGTYGVVYKARNKL--TGEVVALKKI-----PSTAIREISLLKELNHPNIVKLLDVIH--TENKLYLVFEFLHQDLKKFMDASA-------LTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE----GAIKLADFGLARAFGVPVRT---YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS---------EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFS-----KV----VPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EK4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 10435 for 2178 contacts (4.8/contact) +
2D Compatibility (PS) -27519 + (NN) -613 + (LL) 5712
1D Compatibility (HY) 16400 + (ID) 750
Total energy: 3665.0 ( 1.68 by residue)
QMean score : 0.171
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