Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPR---GAFPPR-GPRPV-QSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGNPE |
4BGQ Chain:A ((11-301)) | --MNKFEILGVVGEGAYGVVLKCRHKETHEIVAIKKFK----------VKETTLRELKMLRTLK---QENIVELKEAFRR-----RGKLYLVFEYVEKNMLELLEEMP-NGVPPEKVKSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSE---------TRWYRSPELLLGAPYGKSVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPSEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILNSVLLDLMKNLLKLDPADRYLTEQCLNHPTFQTQRL--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4BGQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -151579 for 2069 contacts (-73.3/contact) +
2D Compatibility (PS) -28769 + (NN) -14770 + (LL) 496
1D Compatibility (HY) -26400 + (ID) 4850
Total energy: -225872.0 ( -109.17 by residue)
QMean score : 0.503
|
|
|