Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDYDFKVKLSSERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDPLPTSDVFAGCQIPYPKREFLTEEEPDDKGDKKNQQQQQGNNHTNGTGHPGNQDSSHTQGPPLKKVRVVPPTTTSGGLIMTSDYQRSNPHAAYPNPGPSTSQPQSSMGYSATSQQPPQYSHQTHRY |
| 4EK4 Chain:A ((11-295)) | ------------------------EKIGEGTYGVVYKARNKL--TGEVVALKKI-----PSTAIREISLLKELNHPNIVKLLDVIH--TENKLYLVFEFLHQDLKKFMDASA-------LTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT----EGAIKLADFGLARAFGVPVRT---YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS---------EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD-----FSKV----VPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL----------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EK4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 6166 for 2196 contacts (2.8/contact) +
2D Compatibility (PS) -27469 + (NN) 2713 + (LL) 4720
1D Compatibility (HY) 16000 + (ID) 850
Total energy: 1280.0 ( 0.58 by residue)
QMean score : 0.157
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