Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGRIQRNKIKVEIKKLSHGKDLPLPCYATMQSAGMDLYAALGNSIVLNPLERLLIPTGIVIVIPNGFEGQIRPRSGLAAKYGITVLNSPGTIDSDYRGEVKVCLINLSNQPYEIKRGDRIAQILIAPVFRVIWDDAERLCTEETERSAGGFGSSGR
3LQW Chain:A ((26-151))
----------LLVKKL--VEDAIVPTRGSKCAAGIDLYSNTN--FIIQPHERFLVSTGVSVQIPHQCYGRIAPRSSLALKYGIDVG--AGVIDEDYRGEIKVILFNHSNEIFNGRKGDRIAQLIIERISYCRISEVKEL--NTT------------
General information:
TITO was launched using:
RESULT:
Template:
3LQW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96729 for 844 contacts (-114.6/contact) +
2D Compatibility (PS) -13589 + (NN) -3664 + (LL) 528
1D Compatibility (HY) -10000 + (ID) 2650
Total energy: -126104.0 ( -149.41 by residue)
QMean score : 0.400
(partial model without unconserved sides chains):
PDB file :
Tito_3LQW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LQW-query.scw
PDB file :
Tito_Scwrl_3LQW.pdb
: