Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ----------------------------------------------------------------------------------------------------------LEKERFRTELIGEKIGQLCKTYQFTYG------YRKIAALMKQEEQVGINKVQRIMQKYQWQCQVKVKKKNRPGSAYYQTENHLNRNFQASQPLEKLTTDIT-----YLYFGDCRLYLSSIMDLYNGEIVAYSIGE---KQTQN---------------------------------------------------------------------------------------------------------------------------------------------------- |
4XFK Chain:A ((9-399)) | AEPLKIALVETLSGPQASTGLLYRAAVLYQLGKINEAGGFNGEKIQILEYDNQGGPVGAADRVKAAIADGAQIIVQGSSSAVAGQITEDVRKYNLRNKGKEVLYLNLGAEA--LELTGSK----CHFYHFRFSPNAAIRFKTVAQGMKDKGILG-ERAYSINQNYSWGVDVENTVVANAKEIGYEVVDKTLHEVNKIQDFSPYVAKIQAANVDTVFTGNWSNDLLLLMKAASGAGLKAKFATSFLDQPGNIGNAGAIAEGHIVSTPFNPEANGEASMAFAEDYKKVTGHYPSYVEPAAVFGLQLFGEALKNVKPGEGKINTTDIALAIENASVKTPMGDYSMRSDDHQAKFPMVVQEVSKKARIKADGTEYGFLPFKTFTGDESIDPVQESCSMKRPG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XFK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8545 for 871 contacts (-9.8/contact) +
2D Compatibility (PS) -12730 + (NN) -1877 + (LL) 764
1D Compatibility (HY) -5200 + (ID) 1350
Total energy: -28938.0 ( -33.22 by residue)
QMean score : 0.171
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