Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTIKNKVIIITGASSGIGKATALLLAEKGAKLVLAARRVEK-LEKIVQTIKANSGEAIFAKTDVTKREDNKKLVELAIERYGKVDAIFLNAGIMPNSPLSALKEDEWEQMIDINIKGVLNGIAAVLPSFIAQ-KSGHIIATSSVAGLKAYPGGAVYGATKWAVRDLMEVLRMESAQEGTNIRTVTIYPAAINTELLETITDKE-TEQGMTS-LYKQYGITPDRIASIVAYAIDQPEDVNVNEFTVGPTSQPW |
| 1GEE Chain:A ((4-237)) | -DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYA--PKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEAS--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GEE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130340 for 1918 contacts (-68.0/contact) +
2D Compatibility (PS) -25116 + (NN) -9488 + (LL) 984
1D Compatibility (HY) -10800 + (ID) 3550
Total energy: -178310.0 ( -92.97 by residue)
QMean score : 0.603
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