Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VKHIVIIGGGLSGLAAAYELQKTHPNYTWELVEKDEKLGGKFETVKRDGFLIEKGPDSFLARKPAGVGLVKDLGLEDKLIANATGRSYIYHQKALHPIPEGSVMGIPTDKEALLASTLVSEIGKARALQEPTMER---NNQERDQALGDFFEARFGKELVKTIIEPLLSGIYAGDIYKMSLRATFPQFEQTVKKYGNLMDGLK----ESSMQTTGTKATIGAFRTLEGGLDALPKAIAAALPKENLHTAKQATEIVKKNNAYEISFADGDKMEADGVIIAATHDALIHLLAETTTEPFAGQPLTTLATVSLAYNEQDVPILPDGTGYLVARTAPYKTTACTWVQKKWPHMVPKNKMLLRGFVGKAGETWLEQASDEAIVSAVLRDYAEIMDLHAAPLFYEVSRMKSAMPQYLVNHQDRLKQLKKNI-KTDYPGVFFAGMSYEGVGIPDCIAGAQTAAKELVDYLEEV |
| 3LOV Chain:A ((4-465)) | SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVATYREDGFTIERGPDSYVARKHILTDLIEAIGLGEKLVRNNTSQAFILDTGGLHPIPKGAVMGIPTDLDLFRQTTLLTEEEKQEVADLLLHPSDSLRIPEQDIPLGEYLRPRLGDALVEKLIEPLLSGIYAGNIDQMSTFATYPQFVANEQKAGSLFEGMRLMRP------------TGQFLSLETGLESLIERLEEVLERSEIRLETPLLAISREDGRYRLKTD-HGPEYADYVLLTIPHPQVVQLLPDAHLPELEQLTTHSTATVTMIFDQQQSL-PIEGTGFVVNRRAPYSITACTAIDQKWNHS-APDHTVLRAFVGRPGNDHLVHESDEVLQQAVLQDLEKICGRTLEPKQVIISRLMDGLPAYTVGHADRIQRVREEVLAQ-YPGIYLAGLAYDGVGLPDCVASAKTMIESIELEQ--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3LOV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -244559 for 3744 contacts (-65.3/contact) +
2D Compatibility (PS) -47334 + (NN) -17817 + (LL) 1264
1D Compatibility (HY) -32400 + (ID) 8150
Total energy: -348996.0 ( -93.21 by residue)
QMean score : 0.519
|
|
|