Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
PRCPNLDEPTVGIDPELRKTIWEELDDLKA-NGKCILVTTHVMDEAEK-CDRLAMIRNGEIIAVGTPQELSSKTSSGKLEDAFLEFGGKH
2IT1 Chain:A ((152-225))
PEVLLLDEPLSNLDALLRLEVRAELKRLQKELGITTVYVTHDQAEALAMADRIAVIREGEILQVGTPDEVYYKP----------------
General information:
TITO was launched using:
RESULT:
Template:
2IT1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9753 for 400 contacts (-24.4/contact) +
2D Compatibility (PS) -8120 + (NN) -5141 + (LL) 492
1D Compatibility (HY) -3600 + (ID) 1500
Total energy: -27622.0 ( -69.06 by residue)
QMean score : 0.441
(partial model without unconserved sides chains):
PDB file :
Tito_2IT1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IT1-query.scw
PDB file :
Tito_Scwrl_2IT1.pdb
: