Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDYDVIVIGGGPSGLMAAISAAEKNKRVLLIEKGPKLGRKLIMSGGGRC-NVTN-R-RPAEEIIKHIP------GNGRFLYSAFHAFDNEDIIRFFERLGVALKEEDHGRMF-----------------PV-----SNSARSVAEAMIQRMEKLGVKIYMQTAVKQVDYEDGHVKGVTLK---DG--QEISASAVIVAVGGKSVP------RTGSTGDGYAWAKKAGHTITELYPTEVPITSSEPFIKQKVLQGTSLRDVSLSVLNAKGKPIITHQMDMIFTHFGVSG----PAALRCSMFVLRELKKTGA----GTVKMRLDLFPNVSAAELSKDVYKLLEENPKKALKNSLSSLLQEKMLLFLLEKADLEETAEYKQVSPKKIEQFIQLLKDFTFEVNGTLDFEKAFVTGGGVSVKEIKPKEMQ-----SKLMEGLFFCGEILD--ING--YTGGYNITCALVTGHTAGAYAAEVSNA |
| 2H88 Chain:A ((18-433)) | -EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEDDNWRWHFYDTVKGSDWLGDQDAIHYMTEQ--APAAVIELENYGMPFSRTEEGKIYQRAFGGQSLQFGKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYGRTYFSCTSAHTSTGDGTAMVTRAGLPCQDLEFVQFHPTGIYG---AGCL----IT---EGCR-GEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTIEIRE--GRGCGPEKDHVYLQL-HHLPPQQLAT---RLP------------------GISETAMIFAGVDVTK-------E------------PIPVLPTVHY-----NMGGIPTNYKG-QVITHVNGEDKVVPGLYACGEAASASVHGANRLGANSLLDLVVFGRACALTIAETCK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2H88.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -159807 for 3184 contacts (-50.2/contact) +
2D Compatibility (PS) -38740 + (NN) -9259 + (LL) 4652
1D Compatibility (HY) -8800 + (ID) 3300
Total energy: -215254.0 ( -67.60 by residue)
QMean score : 0.475
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