Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKAIVMDFDGIVIDTEVVWYEIFKEWFKTKQNYDLSIEEFLQCVGSNVDDLFRELNEKNQMDINRQVFEAETQATFIEN--SKSLPAKEGVESFIRELKERGLKLALATSSQRPKPLYHLERLGLLEYFDAIITAEDVTRIKPEPDLFLEALRALDVKASESLIVEDSRNGLLAGNSAGVNVLVIPNEVTKHSDLTPNYLERESLAEVDLTEIMAEYNK
3E58 Chain:A ((4-214))
MVEAIIFDMDGVLFDTEKYYYDRRASFLGQ-KGISIDHLPPSFFIGGNTKQVWENILRDEYDKWDVSTLQEEYNTYKQNNPLPYKELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDIVLSGEEFKESKPNPEIYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGM-DQSAAKGLLDSLTDV--LDLI-----
General information:
TITO was launched using:
RESULT:
Template:
3E58.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75462 for 1734 contacts (-43.5/contact) +
2D Compatibility (PS) -22339 + (NN) -9298 + (LL) 460
1D Compatibility (HY) -13600 + (ID) 2750
Total energy: -122989.0 ( -70.93 by residue)
QMean score : 0.503
(partial model without unconserved sides chains):
PDB file :
Tito_3E58.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3E58-query.scw
PDB file :
Tito_Scwrl_3E58.pdb
: