Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSEKNAYAKSGVDVEAGYEVVERIKKHVARTERAGVMGALGGFGGMFDLSQTGVKEPVLISGTDGVGTKLMLAIKYDKHDTIGQDCVAMCVNDIIAAGAEPLYFLDYVATGKNE----PAKLEQVVAGVAEGCVQAGAALIGGETAEMPGMYGEDDYDLAGFAVGVAEKSQIIDGSKVKEGDILLGLAS-SG---IHSNGYSLVRRVFADYTGDEVLPELEGKQLKDVLLEPTRIYVKAALPLIKEELVNGIAHITGGGFIENVPRMFAD-DLAAEIDEDKVPVLPIFKALEKYGDIKHEEMFEIFNMGVGLMLAVSPENVNRVKELL---DEPVYEIGRIIKKADASVVIK
3VIU Chain:A ((39-344))-SEHCAYKNSR-------PLLKALPK-----EGEAVLQGPGENAGVVRVGE----GWAVAFKIESHN-----HPSAVEPFQGAATGVGGILRDIMSMGARPIALLDSLRFGPPEEARSRYLLKGVVSGIAFYGNAIGVPTVGGDLYFHEGYRE--NPLVNAMCLGLLREE-HLKRSRASLGRPIYYAGAKTGRDGI----------------------------VGDPFL--GKLLMEATLEAIELDLVEGVQDMGAAGLTSSLSELAHKSGLGVELHLDLVPTREE--------GMTPEELLLSE-SQERMVLVPKEGKEKALEEVFGRWGLDCVPVARTIPERVFRVLFR


General information:
TITO was launched using:
RESULT:

Template: 3VIU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -163853 for 2223 contacts (-73.7/contact) +
2D Compatibility (PS) -28147 + (NN) -1382 + (LL) 4076
1D Compatibility (HY) -11200 + (ID) 2700
Total energy: -203206.0 ( -91.41 by residue)
QMean score : 0.365

(partial model without unconserved sides chains):
PDB file : Tito_3VIU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VIU-query.scw
PDB file : Tito_Scwrl_3VIU.pdb: