Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAVKKVVTHPAEVLETPAETVTVF-----DKKLKKLLDDMYDTMLEMDGVGLAAPQIGILKRAAVVEIGDDR-----GRIDLVNPEILEKSG-----EQ-TGIEGCLSFPNVYGDVTRADYVKVRAFNRQGKPFILEARGFLARAVQHEMDHLDGVLFTSKISKYYTEDELADMEG
3E3U Chain:A ((2-172))-AVVPIRIVGDPVLHTATTPVTVAADGSLPADLAQLIATMYDTMDAANGVGLAANQIGCSLRLFVYDCAADRAMTARRRGVVINPVLETSEIPETMPDPDTDDEGCLSVPGESFPTGRAKWARVTGLDADGSPVSIEGTGLFARMLQHETGHLDGFLYLDRLIGRYARNAKR----


General information:
TITO was launched using:
RESULT:

Template: 3E3U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 790 -64130 -81.18 -413.74
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -81.18
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.520

(partial model without unconserved sides chains):
PDB file : Tito_3E3U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3E3U-query.scw
PDB file : Tito_Scwrl_3E3U.pdb: