Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLKPFVFITKPIPEEIEAFIGE--HCRYEVWQED-TLPSDVLFEKLKEAEGLLTSGTSGPSINRELLEHA-PKLKVVSNQSVGYDNFDIEAMKERGVVGTHTPYTLDDTVADLAFSLILSSARRVAELDRFVRAGKWGTVEEEA---LFGIDVHHQTLGIIGMGRIGEQAARRAKFGFDMEVLYHNRHRKQET-EDSIGVKYAELDTLLEQSDFILLITPLTDETYHMIGEREFKLMKNSAIFVNISRGKTVDEKALIRALQEGWIRGAGLDVYEKEPVTQDNPLLQLDNVTLLPHIGSATAKVRFNMCKQAAENMLAAIQGQTPKNLTREFQ
2GCG Chain:A ((7-329))-RLMKVFVTRRIPAEGRVALARAADCEVEQWDSDEPIPAKELERGVAGAHGLLC--LLSDHVDKRILDAAGANLKVISTMSVGIDHLALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWT---SWKPLWLCGYGLTQSTVGIIGLGRIGQAIARRLK-PFGVQRFLYTGRQPRPEEAAEFQAEFVSTPELAAQSDFIVVACSLTPATEGLCNKDFFQKMKETAVFINISRGDVVNQDDLYQALASGKIAAAGLDVTSPEPLPTNHPLLTLKNCVILPHIGSATHRTRNTMSLLAANNLLAGLRGEPMPSELK---


General information:
TITO was launched using:
RESULT:

Template: 2GCG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1700 -3078 -1.81 -9.77
target 2D structure prediction score : 0.75
Monomeric hydrophicity matching model chain A : 0.79

3D Compatibility (PKB) : -1.81
2D Compatibility (Sec. Struct. Predict.) : 0.75
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.578

(partial model without unconserved sides chains):
PDB file : Tito_2GCG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2GCG-query.scw
PDB file : Tito_Scwrl_2GCG.pdb: