Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTHSRLIGALTVVAIIVTACGSQPKSQPAVAPTGDAAAATQVPAGQTVPAQLQFSAKTLD-GHDFHGESLLG-KPAVLWFWAPWCPTCQGEAPVVGQVAA-SHPEVTFVGVAGLD-----QVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVD-VVRGRMSQDELTRRVTALTSR
2B5X Chain:A ((3-145))
----------------------------------------------LRQPMPELTGEKAWLNGEVTREQLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDI-TQPIFVDSDHALTDAFENEYVPAYYVFDKTGQLRHFQAGGSGMKMLEKRVNRVLA-
General information:
TITO was launched using:
RESULT:
Template:
2B5X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76556 for 1042 contacts (-73.5/contact) +
2D Compatibility (PS) -14343 + (NN) -5064 + (LL) 3332
1D Compatibility (HY) -5200 + (ID) 1350
Total energy: -99181.0 ( -95.18 by residue)
QMean score : 0.569
(partial model without unconserved sides chains):
PDB file :
Tito_2B5X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2B5X-query.scw
PDB file :
Tito_Scwrl_2B5X.pdb
: