Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMRFLDGHPPGYDLTYNDVFIVPNRSEVASRFDVDLSTADGSGTTIPVVVANMTAVAGRRMAETVARRGGIVILPQDLPIPAVKQTVAFVKSRDLVLDTPVTLAPDDSVSDAMALIHKRAHGVAVVILEGRPIGLVRESSCLGVDRFTRVRDIAVTDYVTAPAGTEPRKIFDLLEHAPVDVAVLTDADGTLAGVLSRTGAIRAGIYTPATDSAGRLRIGAAVGINGDVGAKARALAEAGVDVLVIDTAHGHQVKTLDAIKAVSALDLGLPLAA--GNVVSAEGTRDLLKAGANVVKVGVGPGAMCTTRMMTGVGRPQFSAVLECASAARQLGGHIWADGGIRHPRDVALALAAGASNVMIGSWFAGTYESPGDLMRDRDDQPYKESYGMASKRAVVARTGADNPFDRARKALFEEGISTSRMGLDPDRGGVEDLIDHITSGVRSTCTYVGASNLAELHERAVVGVQSGAGFAEGHPLPAGW
4ZQM Chain:A ((144-387))------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WVRAMMLVDAGVDVLVVDTAHAHNRLVLDMVGKLKSEV-GDRVEVVGGNVATRSAAAALVDAGADAVKVGVGPGSICTTRVVAGVGAPQITAILEAVAACRPAGVPVIADGGLQYSGDIAKALAAGASTAMLGSLLAGTAEAPGELIF-VNGKQYKSYRGMGSLGAM----------------LVPEGIEG----RVPFRGPLSSVIHQLTGGLRAAMGYTGSPTIEVLQ-QAQFVRITPAGL----------


General information:
TITO was launched using:
RESULT:

Template: 4ZQM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -88567 for 1670 contacts (-53.0/contact) +
2D Compatibility (PS) -23703 + (NN) -7277 + (LL) 15664
1D Compatibility (HY) -14800 + (ID) 4650
Total energy: -123333.0 ( -73.85 by residue)
QMean score : 0.336

(partial model without unconserved sides chains):
PDB file : Tito_4ZQM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ZQM-query.scw
PDB file : Tito_Scwrl_4ZQM.pdb: