Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSQNSQIQPQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLESLDPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKRMALPNARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKDTDRDKILTAEEAKDYGIIDTVLEYRKLSAQTA
2ZL4 Chain:J ((20-192))
------------------------------DIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAAAMGAFLLSCGAKGKRFSLPHSRIMIHQP-LGGA-QGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLIDKVLQ---------
General information:
TITO was launched using:
RESULT:
Template:
2ZL4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -120614 for 1368 contacts (-88.2/contact) +
2D Compatibility (PS) -19299 + (NN) -11869 + (LL) 2844
1D Compatibility (HY) -18800 + (ID) 4400
Total energy: -172138.0 ( -125.83 by residue)
QMean score : 0.607
(partial model without unconserved sides chains):
PDB file :
Tito_2ZL4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZL4-query.scw
PDB file :
Tito_Scwrl_2ZL4.pdb
: