Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNDRLQIEDLLLGDGK-EVVKGALITTQYKGTLEDGTLFDSSYE-------RGRPFQCVIGTGRVIKGWDQGLMGMKVGGKRRLFVPSHLAYGERQVG-AHIKPHSNLLFEIELLEVLTRDD
3KZ7 Chain:A ((3-119))
-PPKYTKSILKKGDKTNFPKKGDVVHCWYTGTLPDGTVFDTNIQTSSKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGEKARLEIEPEWAYGKKGQPDAKIPPNTKLIFEVELVDID----
General information:
TITO was launched using:
RESULT:
Template:
3KZ7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49248 for 780 contacts (-63.1/contact) +
2D Compatibility (PS) -11332 + (NN) 2056 + (LL) 208
1D Compatibility (HY) -8000 + (ID) 1950
Total energy: -68266.0 ( -87.52 by residue)
QMean score : 0.602
(partial model without unconserved sides chains):
PDB file :
Tito_3KZ7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KZ7-query.scw
PDB file :
Tito_Scwrl_3KZ7.pdb
: