Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDNHIDVLINGCGIGGAMLAYLLGRQ-----GHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDGE--LLRYF---NYS-SVDARGYFILMPCESLRRLVLEKIDGEA--TVEMLFETRIEAVQRD--------------------------------------------ERHAIDQVRLN------DGRVLRPRVVVGADGIASYVRRRLLDIDVERRPYPSP--MLVGTFAL-APCVAERNRL-Y-VDSQGGLAYFYPIGFDRARLVVSFPREEARELMADTRGESLRRRLQRFVGDESAEAIAAVTGTSRFKGIPIGYLNLDRYWA-DNVAMLGDAIHNVHPITGQGMNLAIEDASALADALDLALRDACALEDALAGYQAERFPVNQAIVSYGHALATSLEDRQRFAGVFDTALQGSSRTPEALGGERSYQPVRSPAPLG |
| 1PN0 Chain:A ((4-426)) | YSESYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQCRTLESLKNLGLADKILSEANDM-STIALYNPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAEDPEAYPVTMTLRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHSWVRR-TLGFEMIGEQTDYIWGVLDAVPASNFPD--IRSRCAIHSAES-GSIMIIPRENNLVRFYVQLQA------TKFTP-EVVIANAKKIFHPYTFD-VQQL--DWF-TAYHIGQRVTEKFSKDERVFIAGDACHTHSPKAGQGMNTSMMDTYNLGWKLGLVLTGRAKR-DILKTYEEERQPFAQALIDFDHQFSRLFSGR------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1PN0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -228095 for 2906 contacts (-78.5/contact) +
2D Compatibility (PS) -36719 + (NN) -4349 + (LL) 2492
1D Compatibility (HY) -12400 + (ID) 3750
Total energy: -282821.0 ( -97.32 by residue)
QMean score : 0.420
|
|
|