Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTNPTFGEKIDNVDYRSRFGVYAIIPNPT------HDKIILVQAP-----------NGAWFLPGGEIEENENHLEALTRELIEELGYSATIGHYYGQADEYFYSRHRDTYYYNPAYIYEVTAYHK---EQAPLEDFNHLAWFPIQEAKEKLKRGSHRWGVQAWEKNHHSRK
3I9X Chain:A ((26-174))
----------------DGYTSDMILTTVKELNGKPTLHILLIKRSLTNAEGKPNMEGGKWAVPGGFVDENESAEQAAERELEEETSLTDIPLIPFGVFDKPGR----DPRGWIISRAFYAIVPPEALEKRAAGDDAAEIGLFPMTEALELPLAFDHLDMLKKAFSAITEEF
General information:
TITO was launched using:
RESULT:
Template:
3I9X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35976 for 949 contacts (-37.9/contact) +
2D Compatibility (PS) -14004 + (NN) -2161 + (LL) 792
1D Compatibility (HY) 1200 + (ID) 1400
Total energy: -51549.0 ( -54.32 by residue)
QMean score : 0.353
(partial model without unconserved sides chains):
PDB file :
Tito_3I9X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3I9X-query.scw
PDB file :
Tito_Scwrl_3I9X.pdb
: