Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALDVKSRAKRYEK-LDFLGEGQFATVYKARDK--NTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAF--GHKSNISLVFDFMETDLEVIIKD-----NSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLL----DENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSD----LDQLTRIFETLGTPTEEQWPDMCSLPDYVTFK------SFPGIPLHHIF----SAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTPGCQLPRPNCPVETLKEQSNPALAIKRKRTEALEQGGLPKKLIF |
| 3RGF Chain:A ((18-346)) | -------VEDLFEYEGCKVG-----HVYKAKRKDGKDDKDYALKQIEG-------TGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASK----LPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFAR-------------VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ-NPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDPLPTSD------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RGF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -188222 for 2002 contacts (-94.0/contact) +
2D Compatibility (PS) -28719 + (NN) -17487 + (LL) 4476
1D Compatibility (HY) -26800 + (ID) 5550
Total energy: -262302.0 ( -131.02 by residue)
QMean score : 0.630
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