Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNFKYLFVLMLAVIVFAAACGNSSSLDNQKNASNDSDSKSGGYKPKELTVQFVPSQNAGTLEAKAKPLEKLLSKE---LGIPVKVSVSTNYNTIVEAMKSKKVDVGFLPPTAYTLAHDQ-KAADLLLQAQRFGVKEDGSASKELVDSYKSEILVKKDSKIKSLKDLKGKKIALQDVTSTAGYTFPLAMLKNEAGINA--------TKDMK-I-------------------------VNVKGHDQAVISLLNGDVDAAAVFNDARNTVKKDQPNVFKDTRILKLT--------------QAIPNDTISVRPDMDKDFQEKLKKAFIDIAKSKEGHKIISEVYSHEGYTETKDSNFDIVREYEKLVKDMK |
| 3V83 Chain:A ((23-291)) | ----------------------------------------------KTVRWCAVSEHEAT----KCQSFRDHMKSVIPSDGPSVACVKKASYLDCIRAIAANEADAVTLDAGLVYDAYLAPNNLKPVVAE-FYGSKE------DPQTFYYAVAVVKKDSGF-QMNQLRGKKSCHTGLGRSAGWNIPIGLLYC-DLPEPRKPLEKAVANFFSGSCAPCADGTDFPQLCQLCPGCGCSTLNQYFGYSGAFKCLKDGAGDVAFVKHSTIFENLAN-KADRDQYELLCLDNTRKPVDEYKDCHLAQVPSHTVVARSMGG--KEDLIWELLNQAQE--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3V83.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -54651 for 1649 contacts (-33.1/contact) +
2D Compatibility (PS) -22960 + (NN) -3692 + (LL) 5508
1D Compatibility (HY) -3600 + (ID) 2000
Total energy: -81395.0 ( -49.36 by residue)
QMean score : 0.331
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