Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNFNKLKFGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYVAHEFIQAKYDDEKALNQLGQKCDVITYEFENISAQQLKLLCE-KYNI-PQGYQAIQLLQDRLTEKETLKSAGTKVVPFISVKESTDIDKAIETLGYPFIVKTRFGGYDGKGQVLINNEKDLQEGFKLIETSECVAEKYLNIK-KEVSLTVTRGNNNQITFFPLQENEHRNQILFKTIVPARIDK--TAEAKEQVNKIIQSIHFIGTFTVEFFIDSNNQLYVNEIAPRPHNSGHYSIEACDYSQFDTHILAVTGQSLPNSIELLKPAVMMNLLGKDLDL-----LE-NEFNEHPEWHLHIYGKSGRKDSRKMGHMTVLTNDVNQTEQDMYAKFEGSN |
| 3AX6 Chain:A ((1-368)) | --------MKKIGIIGGGQLGKMMTLEAKKMGFYVIVLDPTPRSPAGQVADEQIVAGFFDSERIEDLVKGSDVTTYDLEHIDVQTLKKL-YNEGYKIHPSPYTLEIIQDKFVQKEFLKKNGIPVPEYKLVKDLES---DVREFGFPVVQKARKG-----GVFIIKNEKDLE--NAI--KGETYLEEFVE-IEKELAVMVARNEKGEIACYPVVEMY------DTVIAPARIEEKYSKIAREIATSVVEALEGVGIFGIEMFLTKQGEILVNEIAPRPHNSGHYTIEACVTSQFEQHIRAIMNLPLGST-ELLIPAVMVNLLGEEGYYGKPALIGLEEALAIEGLSLHFYGKKETRPYRKMGHFTVVDRDVERALEKALRAKKIL- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3AX6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -106520 for 2930 contacts (-36.4/contact) +
2D Compatibility (PS) -38228 + (NN) -22419 + (LL) 1732
1D Compatibility (HY) -26400 + (ID) 6650
Total energy: -198485.0 ( -67.74 by residue)
QMean score : 0.477
|
|
|