Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVVGDFPEERDTIVIGAGPGGYVAAIRAAQLGQKVTIIEKEYYGGVCLNVGCIPSKALITIGHRFKEAGHSD---NMGITADNVNLDFTKAQEWKGGVVNKLTSGVKGLLKK-NKVEMLEGEAFFVDD---------HSLRVIHPDSAQTYTFNNVIIATGSRPIEIPGFKYGK------RVLSSTGALALTEVPKKLVVIGGGYIGTELGGAFAN-LGTELTILEGGPEILPTY-EKDMVSLVKRNLKSKNVEMVTKALAKSAEETENGVKVTYEANG---ETKTIEADYVLVTVGRRPNTDEIGLEQAGVKVTERGLVEVDKQGRSNVSNIFAIGDIVPGV-PLAHKASYEAKIAAEAIAGEKSENDYTALP------AVVFSDPELATVGLTEKEAKEKGFDVKAAKFPFGGNGRALSLDAPEG----FVRLVTRKEDGLVIGAQVAGM-NASDIISEIGLAIESGITAEDIALTIHAHP---SLGELTMEAAELALGRPIHM |
1EBD Chain:A ((1-455)) | ------AIETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALISASHRYEQAKH-SEEMGIKAE--NVTIDFAKVQEWKASVVKKLTGGVEGLLKGNK-VEIVK-GEAYFV-DANTVRVVN-------GDSAQTYTFKNAIIATGSRPIELPNFKFS-NRILDSTGALNLG-----EVPKSLVVIGGGYIGIELGTAYANF-GTKVTILEGAGEILSG-FEKQMAAIIKKRLKKKGVEVVTNALAKGAEERE-DGVTVTYEANGET-KTID-ADYVLVTVGRRPNTDELGLEQIGIKMTNRGLIEVDQQCRTSVPNIFAIGDIVPG-PALAHKASYEGKVAAEAIAG-----HPSAVDYVAIPAVVFSD-PECASVGYFEQQAKDEG----IDVIAAKFPFAANGRALALNDTDGFLKLVVRKEDGVIIGAQIIG-PNASDMIAELGLAIEAGMTAEDIALT--IHAHPT-LGEIAMEAAEVAL------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EBD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -207934 for 3488 contacts (-59.6/contact) +
2D Compatibility (PS) -45700 + (NN) -13164 + (LL) 3480
1D Compatibility (HY) -39600 + (ID) 12800
Total energy: -315718.0 ( -90.52 by residue)
QMean score : 0.512
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