Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEIKLEQLGYCYQKNSPFEKRALLD-VNVSFDSGSYSAIIGHTGSGKSTLLQHLNALLMPTEGKITVGDREIVAGV-------------KQKKLRDLRKKVGIVFQFPEAQLFEETVEKDICFGPMNF--GVSEEDAKLRAKKVIYEVGLTEEI--LSRSPFELSGGQMRRVAIAGVLAM-DPEVLVLDEPTAGLDPHGREEIMEMFYNLHKEKGLTTVLVTHSMEDAARYAEKIVLMKA-GTVLQIGTPREIFAKPDELVDLGLSVPDVVRFQGLFERKFDVKLTKTCLTIDELTTEMAPYLAKGGA |
| 1B0U Chain:A ((5-261)) | --NKLHVIDLHKRYGG---HEVLK-GVSLQARAGDVISIIGSSGSGKSTFLRCINFLEKPSEGAIIVNG----QNINLVRDKDGQLKVADKNQLRLLRT-R-LTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKHDARERALKYLAKVGIDERAQG--KYPVHLSGGQQQRVSIARALAME-PDVLLFDEPTSALDPELVGEVLRIMQQLAEE-GKTMVVVTHEMGFARHVSSHVIFLH-QGKIEEEGDPEQVFGNP-QS--------------------------------PRLQQFLKGSLKKLE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1B0U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127755 for 1902 contacts (-67.2/contact) +
2D Compatibility (PS) -26494 + (NN) -18042 + (LL) 3700
1D Compatibility (HY) -14800 + (ID) 4000
Total energy: -187391.0 ( -98.52 by residue)
QMean score : 0.624
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