Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLKAIVMDFDGIVIDTEV-VWYEIFKEWFKTKQNYDLSIEEFLQCVGSNVDDLFR-------------ELNEKNQMDINRQVFEAETQATFIENS-KSLPAKEGVESFIRELKERGLKLALATSSQRPKPLYHLERLGLLEY-FDAIITAEDVTRIKPEPDLFLEALRALDVKA-SESLIVEDSRNGLLAGNSAGVNVLVIPNEVTKH-----------------------S--DLTPNYLERESLAEVDLTEIMAEYNK |
1SWV Chain:A ((5-260)) | KIEAVIFAWAGTTVDYGCFAPLEVFMEIFHK-RGVAITAEEARKPMGLLKIDHVRALTEMPRIASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTIETMQEL--ESVMEHIE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SWV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -82844 for 1839 contacts (-45.0/contact) +
2D Compatibility (PS) -22986 + (NN) -9421 + (LL) 228
1D Compatibility (HY) -7600 + (ID) 2100
Total energy: -124723.0 ( -67.82 by residue)
QMean score : 0.532
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