Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGLFITFEGPEGAGKTTVLQEIKNILTAEGLQVMATREPGGIDIAEQIREVILNENNILMDPKTEALLYAAARRQHLVEKVKPALEQGFIVLCDRFIDSSLAYQGYARGLGIDEVLSINEFAIGDMMPHVTVYFSIDPEEGLKRIYANGSREKNRLDLEKLDFHTKVQEGYQELMKRFPERFHSVDAGQSKDLVVQDVLKVIDEALKKIQL
3HJN Chain:A ((1-192))
---MFITFEGIDGSGKSTQIQLLAQYLEKRGKKVILKREPGGTETGEKIRKILLEE---EVTPKAELFLFLASRNLL-VTEIKQYLSEGYAVLLDRYTDSSVAYQGFGRNLGKEIVEELNDFATDGLIPDLTFYIDVDVETALKRK---N-----RFEK--REFLERVREGYLVLAREHPERIVVLDGKRSIEEIHRDVVREVKRR------
General information:
TITO was launched using:
RESULT:
Template:
3HJN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103716 for 1543 contacts (-67.2/contact) +
2D Compatibility (PS) -21113 + (NN) -11729 + (LL) 1516
1D Compatibility (HY) -13600 + (ID) 3700
Total energy: -152342.0 ( -98.73 by residue)
QMean score : 0.579
(partial model without unconserved sides chains):
PDB file :
Tito_3HJN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HJN-query.scw
PDB file :
Tito_Scwrl_3HJN.pdb
: