Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLNILKNWKNQQTAASNLERYTKEDILKGEIPEHIAIIMDGNGRWAKKRSLPRIAGHHEGMKVVKRTTKLANELGVKVLTLYAFSTENWKRPKMEVDFLMKLPEEFLNTYLPELVEENVQVRIIGDETALPAHTLRAIEKAVQDTAQNDGMILNFALNYGGRTEIVSAAKSLAEKVKEGSLNIEDIDESLFSTYLMTESLQDPELLIRTSGEIRLSNFMLWQVAYSEFVFTDVLWPDFKEDHFLQALGEFQQRGRRFGGI
3UGS Chain:B ((4-225))----------------------------MNELKHLAVVMDGNR--------------SQGVKTMQKLMEVCMEENISNLSLFAFSTENWKRPKDEIDFIFELLDRCLDEALEKFEKNNVRLRAIGDLSRLEDKVREKITLVEEKTKHCDALCVNLAISYGARDEIIRAAKRVIEKK-------LELNEENLTQNLDL--PLDVDLMLRVGNAKRLSNFLLWQCSYAEIYFSETLFPSLTKREFKRIIKEFRNRERTFGK-


General information:
TITO was launched using:
RESULT:

Template: 3UGS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 918 -111941 -121.94 -538.18
target 2D structure prediction score : 0.76
Monomeric hydrophicity matching model chain B : 0.76

3D Compatibility (PKB) : -121.94
2D Compatibility (Sec. Struct. Predict.) : 0.76
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.575

(partial model without unconserved sides chains):
PDB file : Tito_3UGS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3UGS-query.scw
PDB file : Tito_Scwrl_3UGS.pdb: