Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRKPLIAGNWKMNLNHYEAIALVQKIAFSLPDKYYDRVDVAVIPPFTDLRSVQTLVDGDKLRLTYGAQDLSPHDSGAYTGDVSGAFLAKLGCSYVVVGHSERRTYHNEDDALVAAKAATALKHGLTPIVCIGEHLDVREAGNHVAHNIEQLRGSLAGLLAEQIGSVVIAYEPVWAIGTGRVASAADAQEVCAAIRKELASLASPRIADTVRVLYGGSVNAKNVGDIVAQDDVDGGLVGGASLDGEHFATLAAIAAGGPLP
1O5X Chain:A ((3-247))
--RKYFVAANWKCNGTLESIKSLTNSFNNLDF--DPSKLDVVVFPVSVHYDHTRKLL---QSKFSTGIQNVSKFGNGSYTGEVSAEIAKDLNIEYVIIGHFERRKYFHETDEDVREKLQASLKNNLKAVVCFGESLEQREQNKTIEVITKQVKAFVDLI--DNFDNVILVYEPLWAIGTGKTATPEQAQLVHKEIRKIVKDTCGEKQANQIRILYGGSVNTENCSSLIQQEDIDGFLVGNASLKE-SFVDIIKSA------
General information:
TITO was launched using:
RESULT:
Template:
1O5X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -149167 for 2053 contacts (-72.7/contact) +
2D Compatibility (PS) -27758 + (NN) -18829 + (LL) -36
1D Compatibility (HY) -16400 + (ID) 4250
Total energy: -216440.0 ( -105.43 by residue)
QMean score : 0.547
(partial model without unconserved sides chains):
PDB file :
Tito_1O5X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1O5X-query.scw
PDB file :
Tito_Scwrl_1O5X.pdb
: